Package: bro Description-md5: 664f46ed224a9494f1f2e07c3207215c Description-en: passive network traffic analyzer Bro is primarily a security monitor that inspects all traffic on a link in depth for signs of suspicious activity. More generally, however, Bro supports a wide range of traffic analysis tasks even outside of the security domain, including performance measurements and helping with trouble-shooting. . Bro comes with built-in functionality for a range of analysis and detection tasks, including detecting malware by interfacing to external registries, reporting vulnerable versions of software seen on the network, identifying popular web applications, detecting SSH brute-forcing, validating SSL certificate chains, among others. Package: bro-common Description-md5: f3249b0e1658da94beb4b349761dc56d Description-en: passive network traffic analyzer -- architecture-independent parts This package contains the architecture-independent parts for the Bro network security monitor. Package: bro-dev Description-md5: f5a953366a23722e1d2b68250de58d31 Description-en: passive network traffic analyzer -- development files This package contains the header files needed for building extensions for the Bro network security monitor. Package: debcargo Description-md5: f2f7a9e991939d8ab97f55a64774c1dd Description-en: Create a Debian package from a Cargo crate This package contains the following binaries built from the Rust crate "debcargo": - debcargo Package: dh-modaliases Description-md5: 1a811f1261ebf8d94f48be93de246b96 Description-en: debhelper extension for scanning kernel module aliases dh_modaliases is useful for packages that ship third-party kernel modules, either in binary form, or as sources (with e. g. DKMS). It extracts the modules' modaliases from either the compile .ko files themselves (for packages which ship them in compiled form, using modinfo), or from a package file debian/packagename.modaliases. . This enables software which is looking for missing driver packages (such as Jockey or the operating system installer) to identify which package(s) will provide a driver for a piece of hardware, identified by its modalias. Package: freeipmi Description-md5: 691cff5182f8f0538ed75a6712f46bcd Description-en: GNU implementation of the IPMI protocol FreeIPMI is a collection of Intelligent Platform Management IPMI system software. It provides in-band and out-of-band software and a development library conforming to the Intelligent Platform Management Interface (IPMI v1.5 and v2.0) standards. . This metapackage depends on all separate modules of freeipmi. Package: freeipmi-bmc-watchdog Description-md5: de829f061dc1ffe58f7abb1eed647eb0 Description-en: GNU implementation of the IPMI protocol - BMC watchdog FreeIPMI is a collection of Intelligent Platform Management IPMI system software. It provides in-band and out-of-band software and a development library conforming to the Intelligent Platform Management Interface (IPMI v1.5 and v2.0) standards. . This package contains a watchdog daemon for hardware BMC watchdogs. Package: freeipmi-ipmidetect Description-md5: f8c1d52ac5eb3aad1539b827d381d2dd Description-en: GNU IPMI - IPMI node detection tool FreeIPMI is a collection of Intelligent Platform Management IPMI system software. It provides in-band and out-of-band software and a development library conforming to the Intelligent Platform Management Interface (IPMI v1.5 and v2.0) standards. . This package contains a tool and a daemon for detecting IPMI nodes. Package: freeipmi-ipmiseld Description-md5: b124bef84b88838f40cc0b634b3e466f Description-en: GNU IPMI - IPMI node detection tool FreeIPMI is a collection of Intelligent Platform Management IPMI system software. It provides in-band and out-of-band software and a development library conforming to the Intelligent Platform Management Interface (IPMI v1.5 and v2.0) standards. . This package contains ipmiseld which takes the system event log from the BMC and imports it to syslog Package: glibc-source Description-md5: 1892ef83f2f36db0d236ccc041158b32 Description-en: GNU C Library: sources This package contains the sources and patches which are needed to build glibc. Package: golang-github-snapcore-snapd-dev Description-md5: a2d3a19f6630f9476511151dac13666a Description-en: snappy development go packages. Use these to use the snappy API. Package: golang-github-ubuntu-core-snappy-dev Description-md5: 1f317b04f78374dba7d1e14def0b7f80 Description-en: transitional dummy package This is a transitional dummy package. It can safely be removed. Package: ifenslave Description-md5: 74732f22bb89d876029092ddddb4e653 Description-en: configure network interfaces for parallel routing (bonding) This is a tool to attach and detach slave network interfaces to a bonding device. A bonding device will act like a normal Ethernet network device to the kernel, but will send out the packets via the slave devices using a simple round-robin scheduler. This allows for simple load-balancing, identical to "channel bonding" or "trunking" techniques used in switches. . The kernel must have support for bonding devices for ifenslave to be useful. This package supports 2.6.x kernels and the recent 3.x.x kernels. Package: ifenslave-2.6 Description-md5: 9c4d28f6aed0f5dbf0603d3f68d763cb Description-en: transitional package, use "ifenslave" This is a transitional package to aid migration to "ifenslave". It can be safely removed from the system once nothing depends on it. Package: libips4o-dev Description-md5: 1f80b1a9db7dca58d516ac497ff9bdea Description-en: In-place Parallel Super Scalar Samplesort This is the implementation of the algorithm presented in the eponymous paper, which contains an in-depth description of its inner workings, as well as an extensive experimental performance evaluation. Package: libmoox-typetiny-perl Description-md5: b095b6809b4e6f010555183338154ce8 Description-en: Optimized type checks for Moo + Type::Tiny MooX::TypeTiny optimizes Moo type checks when used with Type::Tiny to perform better. It will automatically apply to isa checks and coercions that use Type::Tiny. Non-Type::Tiny isa checks will work as normal. . This is done by inlining the type check in a more optimal manner that is specific to Type::Tiny rather than the general mechanism Moo usually uses. . With this module, setters with type checks should be as fast as an equivalent check in Moose. . It is hoped that eventually this type inlining will be done automatically, making this module unnecessary. Package: librust-ammonia-dev Description-md5: fddb9129ee9cdc60e627ee4109693681 Description-en: HTML Sanitization - Rust source code This package contains the source for the Rust ammonia crate, packaged by debcargo for use with cargo and dh-cargo. Package: librust-debcargo-dev Description-md5: 4c3157e7e62b3e77538713cf303b5fb5 Description-en: Create a Debian package from a Cargo crate - Rust source code This package contains the source for the Rust debcargo crate, packaged by debcargo for use with cargo and dh-cargo. Package: librust-migrations-macros-dev Description-md5: 798a46f2127b5b2fc8ef1c673bdc84fc Description-en: Codegeneration macros for diesels embedded migrations - Rust source code This package contains the source for the Rust migrations_macros crate, packaged by debcargo for use with cargo and dh-cargo. Package: librust-sequoia-openpgp+bzip2-dev Description-md5: 946a45fb4470c98fecfaac215db0201c Description-en: OpenPGP data types and associated machinery - feature "bzip2" This metapackage enables feature "bzip2" for the Rust sequoia-openpgp crate, by pulling in any additional dependencies needed by that feature. Package: librust-sequoia-openpgp+compression-bzip2-dev Description-md5: 622bcb744d4489af697b8ac25bf22f26 Description-en: OpenPGP data types and associated machinery - feature "compression-bzip2" This metapackage enables feature "compression-bzip2" for the Rust sequoia- openpgp crate, by pulling in any additional dependencies needed by that feature. Package: librust-sequoia-openpgp+compression-deflate-dev Description-md5: b6aa5f35d84aa13fb7088be32c19851a Description-en: OpenPGP data types and associated machinery - feature "compression-deflate" This metapackage enables feature "compression-deflate" for the Rust sequoia- openpgp crate, by pulling in any additional dependencies needed by that feature. Package: librust-sequoia-openpgp+compression-dev Description-md5: f1d6b6b81fbd249a60fc8fd2122dc542 Description-en: OpenPGP data types and associated machinery - feature "compression" This metapackage enables feature "compression" for the Rust sequoia-openpgp crate, by pulling in any additional dependencies needed by that feature. Package: librust-sequoia-openpgp+crypto-nettle-dev Description-md5: 6fab88a079d40b474dfa894d37b2b4c1 Description-en: OpenPGP data types and associated machinery - feature "crypto-nettle" and 1 more This metapackage enables feature "crypto-nettle" for the Rust sequoia-openpgp crate, by pulling in any additional dependencies needed by that feature. . Additionally, this package also provides the "nettle" feature. Package: librust-sequoia-openpgp+default-dev Description-md5: e3d0e606d739869e668e2ffc021f025f Description-en: OpenPGP data types and associated machinery - feature "default" This metapackage enables feature "default" for the Rust sequoia-openpgp crate, by pulling in any additional dependencies needed by that feature. Package: librust-sequoia-openpgp+flate2-dev Description-md5: 9996f3f96c4ed052c45e3db1adcac78a Description-en: OpenPGP data types and associated machinery - feature "flate2" This metapackage enables feature "flate2" for the Rust sequoia-openpgp crate, by pulling in any additional dependencies needed by that feature. Package: librust-sequoia-openpgp+quickcheck-dev Description-md5: 0a6423320bcc68d5807f0b94896001b8 Description-en: OpenPGP data types and associated machinery - feature "quickcheck" This metapackage enables feature "quickcheck" for the Rust sequoia-openpgp crate, by pulling in any additional dependencies needed by that feature. Package: librust-sequoia-openpgp+rand-dev Description-md5: ea80473d7b39dcc13a7cd115fab8318f Description-en: OpenPGP data types and associated machinery - feature "rand" This metapackage enables feature "rand" for the Rust sequoia-openpgp crate, by pulling in any additional dependencies needed by that feature. Package: librust-sequoia-openpgp+x-quickcheck-dev Description-md5: e54fc74c023880d9857d88b3da875ca2 Description-en: OpenPGP data types and associated machinery - feature "x-quickcheck" This metapackage enables feature "x-quickcheck" for the Rust sequoia-openpgp crate, by pulling in any additional dependencies needed by that feature. Package: librust-sequoia-openpgp-dev Description-md5: 16ef96d4c1cf51979c7a0113179bcca5 Description-en: OpenPGP data types and associated machinery - Rust source code This package contains the source for the Rust sequoia-openpgp crate, packaged by debcargo for use with cargo and dh-cargo. Package: magnum-api Description-md5: ae20646c6a12de90fd0830dfefb8e5f3 Description-en: OpenStack containers as a service Magnum is an OpenStack project which offers container orchestration engines for deploying and managing containers as first class resources in OpenStack. It features: * Abstractions for bays, containers, nodes, pods, replication controllers, and services * Integration with Kubernetes and Docker for backend container technology * Integration with Keystone for multi-tenant security * Integration with Neutron for Kubernetes multi-tenancy network security . This package contains the API server. Package: magnum-common Description-md5: 2932a6cef94cee9c86fe7ba523a94e4e Description-en: OpenStack containers as a service - API server Magnum is an OpenStack project which offers container orchestration engines for deploying and managing containers as first class resources in OpenStack. It features: * Abstractions for bays, containers, nodes, pods, replication controllers, and services * Integration with Kubernetes and Docker for backend container technology * Integration with Keystone for multi-tenant security * Integration with Neutron for Kubernetes multi-tenancy network security . This package contains common files for the engine and the conductor. Package: magnum-conductor Description-md5: c1077d8334fcc9029e3acfca19015ef0 Description-en: OpenStack containers as a service - conductor Magnum is an OpenStack project which offers container orchestration engines for deploying and managing containers as first class resources in OpenStack. It features: * Abstractions for bays, containers, nodes, pods, replication controllers, and services * Integration with Kubernetes and Docker for backend container technology * Integration with Keystone for multi-tenant security * Integration with Neutron for Kubernetes multi-tenancy network security . This package contains the conductor server. Package: neutron-macvtap-agent Description-md5: e60c41b51b193c7b7bd59c74ab9bbcd9 Description-en: Neutron is a virtual network service for Openstack - Macvtap L2 Agent Neutron is a virtual network service for Openstack, and a part of Netstack. Just like OpenStack Nova provides an API to dynamically request and configure virtual servers, Neutron provides an API to dynamically request and configure virtual networks. These networks connect "interfaces" from other OpenStack services (e.g., virtual NICs from Nova VMs). The Neutron API supports extensions to provide advanced network capabilities (e.g., QoS, ACLs, network monitoring, etc.) . This package provides the Macvtap L2 Agent. Package: neutron-metering-agent Description-md5: 65dae36f4a24be77bcb88d08a02f05f3 Description-en: Neutron is a virtual network service for Openstack - metering agent Neutron is a virtual network service for Openstack, and a part of Netstack. Just like OpenStack Nova provides an API to dynamically request and configure virtual servers, Neutron provides an API to dynamically request and configure virtual networks. These networks connect "interfaces" from other OpenStack services (e.g., virtual NICs from Nova VMs). The Neutron API supports extensions to provide advanced network capabilities (e.g., QoS, ACLs, network monitoring, etc.) . This package provides the metering agent. Package: neutron-sriov-agent Description-md5: 42989299f1b85c4fc6eccec9138ca534 Description-en: Neutron is a virtual network service for Openstack - SR-IOV agent Neutron is a virtual network service for Openstack, and a part of Netstack. Just like OpenStack Nova provides an API to dynamically request and configure virtual servers, Neutron provides an API to dynamically request and configure virtual networks. These networks connect "interfaces" from other OpenStack services (e.g., virtual NICs from Nova VMs). The Neutron API supports extensions to provide advanced network capabilities (e.g., QoS, ACLs, network monitoring, etc.) . This package provides the Mellanox SR-IOV agent. Package: nova-ajax-console-proxy Description-md5: 571664bc0008e44d5df6784807a6ecf0 Description-en: OpenStack Compute - AJAX console proxy - transitional package OpenStack is a reliable cloud infrastructure. Its mission is to produce the ubiquitous cloud computing platform that will meet the needs of public and private cloud providers regardless of size, by being simple to implement and massively scalable. . OpenStack Compute, codenamed Nova, is a cloud computing fabric controller. In addition to its "native" API (the OpenStack API), it also supports the Amazon EC2 API. . Nova is intended to be modular and easy to extend and adapt. It supports many different hypervisors (KVM and Xen to name a few), different database backends (SQLite, MySQL, and PostgreSQL, for instance), different types of user databases (LDAP or SQL), etc. . This package used to provide the AJAX proxy, which is now gone. Package: nova-api-metadata Description-md5: ae9cd778d7894b1a89d138fe3587a7da Description-en: OpenStack Compute - metadata API frontend OpenStack is a reliable cloud infrastructure. Its mission is to produce the ubiquitous cloud computing platform that will meet the needs of public and private cloud providers regardless of size, by being simple to implement and massively scalable. . OpenStack Compute, codenamed Nova, is a cloud computing fabric controller. In addition to its "native" API (the OpenStack API), it also supports the Amazon EC2 API. . This package provides the metadata API backend for guest VMs. Package: nova-api-os-compute Description-md5: 32fe3c17415adfec970c371f4bdff9b6 Description-en: OpenStack Compute - OpenStack Compute API frontend OpenStack is a reliable cloud infrastructure. Its mission is to produce the ubiquitous cloud computing platform that will meet the needs of public and private cloud providers regardless of size, by being simple to implement and massively scalable. . OpenStack Compute, codenamed Nova, is a cloud computing fabric controller. In addition to its "native" API (the OpenStack API), it also supports the Amazon EC2 API. . This package provides the OpenStack Compute API frontend. Package: nova-api-os-volume Description-md5: f8cc143de25afd88a62e482808826104 Description-en: OpenStack Compute - OpenStack Volume API frontend OpenStack is a reliable cloud infrastructure. Its mission is to produce the ubiquitous cloud computing platform that will meet the needs of public and private cloud providers regardless of size, by being simple to implement and massively scalable. . OpenStack Compute, codenamed Nova, is a cloud computing fabric controller. In addition to its "native" API (the OpenStack API), it also supports the Amazon EC2 API. . This is a dummy transitional package that can be removed after upgrade. Package: nova-cells Description-md5: a630a337cf802c4d29d91c1a6283fac5 Description-en: Openstack Compute - cells OpenStack is a reliable cloud infrastructure. Its mission is to produce the ubiquitous cloud computing platform that will meet the needs of public and private cloud providers regardless of size, by being simple to implement and massively scalable. . OpenStack Compute, codenamed Nova, is a cloud computing fabric controller. In addition to its "native" API (the OpenStack API), it also supports the Amazon EC2 API. . Nova is intended to be modular and easy to extend and adapt. It supports many different hypervisors (KVM and Xen to name a few), different database backends (SQLite, MySQL, and PostgreSQL, for instance), different types of user databases (LDAP or SQL), etc. . This is the Nova cells component. Package: nova-compute-ironic Description-md5: aa367d7b097bfd444b2d66cc349df0b7 Description-en: OpenStack Compute - compute node (Ironic) OpenStack is a reliable cloud infrastructure. Its mission is to produce the ubiquitous cloud computing platform that will meet the needs of public and private cloud providers regardless of size, by being simple to implement and massively scalable. . OpenStack Compute, codenamed Nova, is a cloud computing fabric controller. In addition to its "native" API (the OpenStack API), it also supports the Amazon EC2 API. . Install this package on your compute nodes if you're using Ironic. Package: nova-compute-qemu Description-md5: 46acbb1c9b077142e1930821f7a05aed Description-en: OpenStack Compute - compute node (QEmu) OpenStack is a reliable cloud infrastructure. Its mission is to produce the ubiquitous cloud computing platform that will meet the needs of public and private cloud providers regardless of size, by being simple to implement and massively scalable. . OpenStack Compute, codenamed Nova, is a cloud computing fabric controller. In addition to its "native" API (the OpenStack API), it also supports the Amazon EC2 API. . Nova is intended to be modular and easy to extend and adapt. It supports many different hypervisors (KVM and Xen to name a few), different database backends (SQLite, MySQL, and PostgreSQL, for instance), different types of user databases (LDAP or SQL), etc. . Install this package on your compute nodes if you're using QEmu. Package: nova-compute-vmware Description-md5: 3246e65f6c94fc6b7eccb5b2f332c4f1 Description-en: OpenStack Compute - compute node (VMware) OpenStack is a reliable cloud infrastructure. Its mission is to produce the ubiquitous cloud computing platform that will meet the needs of public and private cloud providers regardless of size, by being simple to implement and massively scalable. . OpenStack Compute, codenamed Nova, is a cloud computing fabric controller. In addition to its "native" API (the OpenStack API), it also supports the Amazon EC2 API. . Nova is intended to be modular and easy to extend and adapt. It supports many different hypervisors (KVM and Xen to name a few), different database backends (SQLite, MySQL, and PostgreSQL, for instance), different types of user databases (LDAP or SQL), etc. . Install this package on your compute nodes if you're using VMware vCenter. Package: nova-compute-xen Description-md5: 8268c70ad765a6427d184e1c58a4472c Description-en: OpenStack Compute - compute node (Xen) OpenStack is a reliable cloud infrastructure. Its mission is to produce the ubiquitous cloud computing platform that will meet the needs of public and private cloud providers regardless of size, by being simple to implement and massively scalable. . OpenStack Compute, codenamed Nova, is a cloud computing fabric controller. In addition to its "native" API (the OpenStack API), it also supports the Amazon EC2 API. . Nova is intended to be modular and easy to extend and adapt. It supports many different hypervisors (KVM and Xen to name a few), different database backends (SQLite, MySQL, and PostgreSQL, for instance), different types of user databases (LDAP or SQL), etc. . Install this package on your compute nodes if you're using Xen. Package: nova-novncproxy Description-md5: f71a025ccadd58aa7f26e66e99818fa8 Description-en: OpenStack Compute - NoVNC proxy OpenStack is a reliable cloud infrastructure. Its mission is to produce the ubiquitous cloud computing platform that will meet the needs of public and private cloud providers regardless of size, by being simple to implement and massively scalable. . OpenStack Compute, codenamed Nova, is a cloud computing fabric controller. In addition to its "native" API (the OpenStack API), it also supports the Amazon EC2 API. . Nova is intended to be modular and easy to extend and adapt. It supports many different hypervisors (KVM and Xen to name a few), different database backends (SQLite, MySQL, and PostgreSQL, for instance), different types of user databases (LDAP or SQL), etc. . This package provides the VNC proxy. It is a publically reachable component which proxies access to VNCs running on compute nodes. Package: nova-serialproxy Description-md5: a8fd3f5d6ac9bda37bd109530d1cfc96 Description-en: OpenStack Compute - serial proxy OpenStack is a reliable cloud infrastructure. Its mission is to produce the ubiquitous cloud computing platform that will meet the needs of public and private cloud providers regardless of size, by being simple to implement and massively scalable. . OpenStack Compute, codenamed Nova, is a cloud computing fabric controller. In addition to its "native" API (the OpenStack API), it also supports the Amazon EC2 API. . Nova is intended to be modular and easy to extend and adapt. It supports many different hypervisors (KVM and Xen to name a few), different database backends (SQLite, MySQL, and PostgreSQL, for instance), different types of user databases (LDAP or SQL), etc. . This package provides the serial proxy. It is a publically reachable component which proxies access to qemu-space running on compute nodes Package: nscd Description-md5: e8172254ec0df735a3e44c0f557100bc Description-en: GNU C Library: Name Service Cache Daemon A daemon which handles passwd, group and host lookups for running programs and caches the results for the next query. You should install this package only if you use slow services like LDAP, NIS or NIS+. Package: nvidia-common Description-md5: f11494e618e154235d7240541a9fc755 Description-en: transitional package for ubuntu-drivers-common This is a transitional package for ubuntu-drivers-common. You can remove it after upgrading. Package: paleomix Description-md5: 7cb3c4aa709e51b480a41a73961d7253 Description-en: pipelines and tools for the processing of ancient and modern HTS data The PALEOMIX pipelines are a set of pipelines and tools designed to aid the rapid processing of High-Throughput Sequencing (HTS) data: The BAM pipeline processes de-multiplexed reads from one or more samples, through sequence processing and alignment, to generate BAM alignment files useful in downstream analyses; the Phylogenetic pipeline carries out genotyping and phylogenetic inference on BAM alignment files, either produced using the BAM pipeline or generated elsewhere; and the Zonkey pipeline carries out a suite of analyses on low coverage equine alignments, in order to detect the presence of F1-hybrids in archaeological assemblages. In addition, PALEOMIX aids in metagenomic analysis of the extracts. . The pipelines have been designed with ancient DNA (aDNA) in mind, and includes several features especially useful for the analyses of ancient samples, but can all be for the processing of modern samples, in order to ensure consistent data processing. Package: php-horde-core Description-md5: 896105547fd444e05a1e68f76e50467f Description-en: Core Horde Framework library A library that provides the core functionality of the Horde Application Framework. . This package is part of Horde, a web application Framework written in PHP with modules like IMP (webmail), Turba (contacts), Kronolith (calendar), Nag (task list), Gollem (file manager), etc. Package: python-biopython-doc Description-md5: 6fcf72d1f7092b01a396411a2821eb9c Description-en: Documentation for the Biopython library Documentation and examples about how to use the Biopython library. . This package also contains the unit tests of the test suite to enable reproducing the test results. Package: python-cobra-data Description-md5: 4a4cb3ebb98b115d80948afaf40ca937 Description-en: constraint-based modeling of biological networks (data) COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely used for genome-scale modeling of metabolic networks in both prokaryotes and eukaryotes. COBRApy is a constraint-based modeling package that is designed to accommodate the biological complexity of the next generation of COBRA models and provides access to commonly used COBRA methods, such as flux balance analysis, flux variability analysis, and gene deletion analyses. . This package provides required and sample data files. Package: python3-biopython-sql Description-md5: 3f85dd1e1e5cbc938e08ce849e824727 Description-en: Biopython support for the BioSQL database schema (Python 3) This is the Biopython interface to a BioSQL database (see www.biosql.org for details). BioPerl, BioJava and BioRuby also provide their own BioSQL interfaces onto the same shared SQL schema. Package: python3-dulwich Description-md5: 0e652fa6210d2be4be4c8bcbadddd180 Description-en: Python Git library - Python3 module Dulwich is a Python implementation of the file formats and protocols used by the Git version control system. It can currently read from and write to existing Git repositories and implements the protocol for pushing and receiving packs from remote servers. . All functionality is available in pure Python, but for improved performance replacements of some modules written in C are also available. This package includes the high performance versions. . This package contains the module built for Python version 3.x. Package: python3-magnum Description-md5: f4d8dc2574026ec1e2611acf745bdc04 Description-en: OpenStack containers as a service - Python 3 library Magnum is an OpenStack project which offers container orchestration engines for deploying and managing containers as first class resources in OpenStack. It features: * Abstractions for bays, containers, nodes, pods, replication controllers, and services * Integration with Kubernetes and Docker for backend container technology * Integration with Keystone for multi-tenant security * Integration with Neutron for Kubernetes multi-tenancy network security . This package contains the Python 3 code. Package: python3-pot Description-md5: 375fa3185a1cee911bc2068ebd2fa1f1 Description-en: Python optimal transport library Python library with solvers for optimization problems related to optimal transport in for example signal and image processing, and machine learning. Package: snap-confine Description-md5: 3223c275ff89224fda1b277eec5e7ffe Description-en: Transitional package for snapd This is a transitional dummy package. It can safely be removed. Package: snapd-xdg-open Description-md5: ba6c49ad1a4e739a75a7e8d0fde06a77 Description-en: Transitional package for snapd-xdg-open This is a transitional dummy package. It can safely be removed. Package: spl Description-md5: b410e0ffa9fce7c3fe01d4e78150bb07 Description-en: Solaris Porting Layer user-space utilities for Linux (dummy) The Solaris Porting Layer (SPL) is a Linux kernel module which provides many of the Solaris kernel APIs. This shim layer makes it possible to run Solaris kernel code in the Linux kernel with relatively minimal modification. The Solaris Porting LAyer Tests (SPLAT) is a Linux kernel module which provides a testing harness for the SPL module. . SPL can be particularly useful when you want to track upstream Illumos (or any other OpenSolaris fork) development closely and don't want the overhead of maintaining a large patch which converts Solaris primitives to Linux primitives. . This is a transitional dummy package. It can safely be removed. Package: spl-dkms Description-md5: 71853a88d424d6856a437f2a601d0de0 Description-en: Solaris Porting Layer kernel modules for Linux (dummy) The Solaris Porting Layer (SPL) is a Linux kernel module which provides many of the Solaris kernel APIs. This shim layer makes it possible to run Solaris kernel code in the Linux kernel with relatively minimal modification. The Solaris Porting LAyer Tests (SPLAT) is a Linux kernel module which provides a testing harness for the SPL module. . SPL can be particularly useful when you want to track upstream Illumos (or any other OpenSolaris fork) development closely and don't want the overhead of maintaining a large patch which converts Solaris primitives to Linux primitives. . This is a transitional dummy package. It can safely be removed. SPL dkms files had been merged into zfs-dkms as of ZFS 0.8.X series. Package: sqv Description-md5: 3c6f44e7b0b5188294ff17feb6a04a15 Description-en: Simple OpenPGP signature verification program This package contains the following binaries built from the Rust crate "sequoia-sqv": - sqv Package: ubuntu-core-launcher Description-md5: 3223c275ff89224fda1b277eec5e7ffe Description-en: Transitional package for snapd This is a transitional dummy package. It can safely be removed. Package: ubuntu-core-snapd-units Description-md5: 1f317b04f78374dba7d1e14def0b7f80 Description-en: transitional dummy package This is a transitional dummy package. It can safely be removed. Package: ubuntu-snappy Description-md5: 1f317b04f78374dba7d1e14def0b7f80 Description-en: transitional dummy package This is a transitional dummy package. It can safely be removed. Package: ubuntu-snappy-cli Description-md5: 1f317b04f78374dba7d1e14def0b7f80 Description-en: transitional dummy package This is a transitional dummy package. It can safely be removed. Package: zfs-dkms Description-md5: 39e75ed3c1d3a5bc9c23ff32d0b5bbe1 Description-en: OpenZFS filesystem kernel modules for Linux OpenZFS is a storage platform that encompasses the functionality of traditional filesystems and volume managers. It supports data checksums, compression, encryption, snapshots, and more. . This DKMS package includes the SPA, DMU, ZVOL, and ZPL components of OpenZFS. Package: zfs-dracut Description-md5: 965d2232071aa7eaad3e0a3ca11764b0 Description-en: OpenZFS root filesystem capabilities for Linux - dracut OpenZFS is a storage platform that encompasses the functionality of traditional filesystems and volume managers. It supports data checksums, compression, encryption, snapshots, and more. . This package adds OpenZFS to the system initramfs with a hook for the dracut infrastructure. Package: zfs-test Description-md5: 626efba8698ac960b7fa793abb13e6d2 Description-en: OpenZFS test infrastructure and support scripts OpenZFS is a storage platform that encompasses the functionality of traditional filesystems and volume managers. It supports data checksums, compression, encryption, snapshots, and more. . This package provides the OpenZFS test infrastructure for destructively testing and validating a system using OpenZFS. It is entirely optional and should only be installed and used in test environments. Package: libgclib-dev Description-md5: 9e6c6f2bb41b72b6ec6259d6e96c5a26 Description-en: header files for Genome Code Lib (GCLib) This is an eclectic gathering of (mostly) C++ code which upstream used for some bioinformatics projects. The main idea is to provide lean code and efficient data structures, trying to avoid too many code dependencies of heavy libraries while minimizing production cycles (and this also implies a decent compile/build time -- looking at you, bloated configure scripts and lengthy compile times of Boost code or other heavy C++ template code..). . This code was gathered even before the C++ STL had been fully adopted as a cross-platform "standard". Since STL by itself is a bit heavier for most of the C++ needs, it is preferred to use simpler&leaner C++ classes or templates for basic strings, containers, basic algorithms etc. . Header files of Genome Code Lib. It is mainly known for being used by StringTie but with its own release cycle. Package: libgclib2 Description-md5: 9c72ef489798045bcaeb2c7757b107f6 Description-en: C++ library to handle biological short sequence data This is an eclectic gathering of (mostly) C++ code which upstream used for some bioinformatics projects. The main idea is to provide lean code and efficient data structures, trying to avoid too many code dependencies of heavy libraries while minimizing production cycles (and this also implies a decent compile/build time -- looking at you, bloated configure scripts and lengthy compile times of Boost code or other heavy C++ template code..). . This code was gathered even before the C++ STL had been fully adopted as a cross-platform "standard". Since STL by itself is a bit heavier for most of the C++ needs, it is preferred to use simpler&leaner C++ classes or templates for basic strings, containers, basic algorithms etc. Package: libhmsbeagle-dev Description-md5: e2cf134283793dc53c4584f6ab2c2591 Description-en: High-performance lib for Bayesian and Maximum Likelihood phylogenetics (devel) BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It can make use of highly-parallel processors such as those in graphics cards (GPUs) found in many PCs. . The project involves an open API and fast implementations of a library for evaluating phylogenetic likelihoods (continuous time Markov processes) of biomolecular sequence evolution. . The aim is to provide high performance evaluation 'services' to a wide range of phylogenetic software, both Bayesian samplers and Maximum Likelihood optimizers. This allows these packages to make use of implementations that make use of optimized hardware such as graphics processing units. . This package contains development files needed to build against Beagle library. Package: libhmsbeagle-java Description-md5: 19e3721dbbb7bb8a6b2e6402430b80ec Description-en: High-performance lib for Bayesian and Maximum Likelihood phylogenetics (java) BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It can make use of highly-parallel processors such as those in graphics cards (GPUs) found in many PCs. . The project involves an open API and fast implementations of a library for evaluating phylogenetic likelihoods (continuous time Markov processes) of biomolecular sequence evolution. . The aim is to provide high performance evaluation 'services' to a wide range of phylogenetic software, both Bayesian samplers and Maximum Likelihood optimizers. This allows these packages to make use of implementations that make use of optimized hardware such as graphics processing units. . This package contains the Java interface. Package: libhmsbeagle1v5 Description-md5: d1ca6965facda724668a6194b79a4004 Description-en: High-performance lib for Bayesian and Maximum Likelihood phylogenetics BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It can make use of highly-parallel processors such as those in graphics cards (GPUs) found in many PCs. . The project involves an open API and fast implementations of a library for evaluating phylogenetic likelihoods (continuous time Markov processes) of biomolecular sequence evolution. . The aim is to provide high performance evaluation 'services' to a wide range of phylogenetic software, both Bayesian samplers and Maximum Likelihood optimizers. This allows these packages to make use of implementations that make use of optimized hardware such as graphics processing units. Package: libghc-contravariant-extras-dev Description-md5: 70d21822a1641f518c142073f3c4a54c Description-en: extras for the "contravariant" package Extras for contravariant, including contrazip functions of multiple arities. . This package provides a library for the Haskell programming language. See http://www.haskell.org/ for more information on Haskell. Package: libghc-contravariant-extras-prof Description-md5: 971f550e000a08bc5e4f645e362a8a30 Description-en: extras for the "contravariant" package; profiling libraries Extras for contravariant, including contrazip functions of multiple arities. . This package provides a library for the Haskell programming language, compiled for profiling. See http://www.haskell.org/ for more information on Haskell. Package: python3-biopython Description-md5: b0edcac4d61d56d664f586a477d26535 Description-en: Python3 library for bioinformatics The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. . It is a distributed collaborative effort to develop Python3 libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. The project works along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project. Package: cairo-dock-switcher-plug-in Description-md5: 0e167051751c2de56c96be23d493e769 Description-en: Switcher plug-in for Cairo-dock A collection of official plug-ins and applets for cairo-dock. . This plug-in allows you to interact with your workspaces. This has 2 modes : compact on one icon and expanded with a sub-dock. Package: cairo-dock-system-monitor-plug-in Description-md5: 4eef51a33bcf1b66ae5b8f2477035005 Description-en: System Monitor plug-in for Cairo-dock A collection of official plug-ins and applets for cairo-dock. . This plug-in shows you the CPU load, RAM usage, graphic card temperature, etc. The user can instantiate this applet several times to show different values each time. Package: cairo-dock-systray-plug-in Description-md5: 8d4cc218de588ec4d43800eb53551713 Description-en: Systray plug-in for Cairo-dock A collection of official plug-ins and applets for cairo-dock. . This plug-in adds the system tray to your dock. Package: cairo-dock-terminal-plug-in Description-md5: 35897ee03b992187ceae7816b7fc3ada Description-en: Terminal plug-in for Cairo-dock A collection of official plug-ins and applets for cairo-dock. . This plug-in add a terminal to cairo-dock. The user can drag'n'drop files or text and select an action. Package: cairo-dock-tomboy-plug-in Description-md5: b2417ca3dda723d45515e1cc59ce771d Description-en: Tomboy plug-in for Cairo-dock A collection of official plug-ins and applets for cairo-dock. . This plug-in controls Gnote or TomBoy's notes directly in the dock. User can search inside notes and display their content on the icons. Package: cairo-dock-toons-plug-in Description-md5: dcf4ce3dc1eaf810071129f49f7fe229 Description-en: Toons plug-in for Cairo-dock A collection of official plug-ins and applets for cairo-dock. . This plug-in displays a toon that will look at user's mouse. Package: cairo-dock-weather-plug-in Description-md5: f61a01eb0f8b0c2f0de698259d00dc73 Description-en: Weather plug-in for Cairo-dock A collection of official plug-ins and applets for cairo-dock. . This plug-in displays weather into your dock. Data are provided by www.weather.com, users can find the location in the config panel. Package: cairo-dock-wifi-plug-in Description-md5: c261a4968732ef1fff1d9775e7d1dc3c Description-en: Wifi plug-in for Cairo-dock A collection of official plug-ins and applets for cairo-dock. . This plug-in shows you the signal strength of the first active Wi-Fi connection. Package: cairo-dock-xfce-integration-plug-in Description-md5: 10449755bca1c05f6c6e207c44c78622 Description-en: Xfce integration plug-in for Cairo-dock A collection of official plug-ins and applets for cairo-dock. . This plug-in provides functions for a better integration into the Xfce environment. This is auto-activated, so you don't need to activate it. Package: cairo-dock-xgamma-plug-in Description-md5: 508425800134a014251e77a1fc4143ef Description-en: Xgamma plug-in for Cairo-dock A collection of official plug-ins and applets for cairo-dock. . This plug-in setup the luminosity of your screen directly from your dock. User can also define a luminosity value that will be applied automatically on startup. Package: hinge Description-md5: 796f6bb30e0dd11acb73bb5eeeaf4c08 Description-en: long read genome assembler based on hinging HINGE is a genome assembler that seeks to achieve optimal repeat resolution by distinguishing repeats that can be resolved given the data from those that cannot. This is accomplished by adding “hinges” to reads for constructing an overlap graph where only unresolvable repeats are merged. As a result, HINGE combines the error resilience of overlap-based assemblers with repeat-resolution capabilities of de Bruijn graph assemblers. Package: libqt5remoteobjects5 Description-md5: d666dc4f6ab4bdf5d242f840f4aa021a Description-en: Qt module for IPC The Qt Remote Objects extends Qt's existing functionalities to enable information exchange between processes or computers. . This package contains the shared library for Qt Remote Objects. Package: libqt5remoteobjects5-bin Description-md5: ebe0aa57785b06d7b375d3dfceb13c20 Description-en: Qt module for IPC — the Replica Compiler (repc) The Qt Remote Objects extends Qt's existing functionalities to enable information exchange between processes or computers. . The Replica Compiler (repc) generates QObject header files based on an API definition file. Package: libqt5remoteobjects5-dev Description-md5: f6e417e25e22e6204d219e89c08d95a2 Description-en: Qt module for IPC — development files The Qt Remote Objects extends Qt's existing functionalities to enable information exchange between processes or computers. . This package contains the development files for qtremoteobjects. Package: libsimtkmolmodel-dev Description-md5: a94aa39a9fa202916155c6b6e98edbd0 Description-en: C++ API for creating molecular models for SimTK (development files) Provides C++ API for creating molecular models whose dynamics can be simulated using the SimTK Simbody library. Molmodel is a programmer's toolkit for building reduced-coordinate, yet still all-atom, models of large biopolymers such as proteins, RNA, and DNA. One can control the allowed mobility. By default, Molmodel builds torsion-coordinate models in which bond stretch and bend angles are rigid while bond torsion angles are mobile. But one is able to rigidify or free any subsets of the atoms, such as the rigid benzene ring. . Molmodel is a C++ API for biochemist-friendly molecular modeling that extends the Simbody API to simplify construction of high-performance articulated models of molecules. . This package contains development files. Package: libsimtkmolmodel3.0 Description-md5: 30a51208d6566143399bdacb8f65c5fd Description-en: C++ API for creating molecular models for SimTK Provides C++ API for creating molecular models whose dynamics can be simulated using the SimTK Simbody library. Molmodel is a programmer's toolkit for building reduced-coordinate, yet still all-atom, models of large biopolymers such as proteins, RNA, and DNA. One can control the allowed mobility. By default, Molmodel builds torsion-coordinate models in which bond stretch and bend angles are rigid while bond torsion angles are mobile. But one is able to rigidify or free any subsets of the atoms, such as the rigid benzene ring. . Molmodel is a C++ API for biochemist-friendly molecular modeling that extends the Simbody API to simplify construction of high-performance articulated models of molecules. Package: python3-kineticstools Description-md5: f48d2b812702c5cb10e797e56a605b0f Description-en: detection of DNA modifications (Python 2 library) Tools for detecting DNA modifications from single molecule, real-time (SMRT®) sequencing data. This tool implements the P_ModificationDetection module in SMRT® Portal, used by the RS_Modification_Detection and RS_Modifications_and_Motif_Detection protocol. Researchers interested in understanding or extending the modification detection algorithms can use these tools as a starting point. . This package is part of the SMRTAnalysis suite and contains the backend Python 2 library. Package: qml-module-qtremoteobjects Description-md5: 159e873d21efad7ba3806af88bb9fce2 Description-en: Qt module for IPC — QML binding The Qt Remote Objects extends Qt's existing functionalities to enable information exchange between processes or computers. . This package provides the QML module for Qt Remote Objects, which can be used from QML as “import QtRemoteObjects 5.12”. Package: qtremoteobjects5-examples Description-md5: 8c64fc6e456c71842a48e493c127d742 Description-en: Qt Remote Objects examples The Qt Remote Objects extends Qt's existing functionalities to enable information exchange between processes or computers. . This package contains Qt 5 Remote Objects examples. Package: python3-cobra Description-md5: 0052f98776eccb61924a15b5d6618e25 Description-en: constraint-based modeling of biological networks with Python 3 COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely used for genome-scale modeling of metabolic networks in both prokaryotes and eukaryotes. COBRApy is a constraint-based modeling package that is designed to accommodate the biological complexity of the next generation of COBRA models and provides access to commonly used COBRA methods, such as flux balance analysis, flux variability analysis, and gene deletion analyses.