libpappsomspp
Library for mass spectrometry
pappso::MsRunXicExtractorDiskBuffer Member List

This is the complete list of members for pappso::MsRunXicExtractorDiskBuffer, including all inherited members.

acquireSlices(const MzRange &mz_range)pappso::MsRunXicExtractorDiskprotected
appendSliceInBuffer(unsigned int slice_number, MassSpectrum &spectrum, std::size_t ipos)pappso::MsRunXicExtractorDiskBufferprotected
appendSliceOnDisk(unsigned int slice_number, MassSpectrum &spectrum, std::size_t ipos)pappso::MsRunXicExtractorDiskprotected
endPwizRead() overridepappso::MsRunXicExtractorDiskBufferprotectedvirtual
flushBufferOnDisk()pappso::MsRunXicExtractorDiskBufferprotected
getMsRunId() constpappso::MsRunXicExtractorInterface
getXicCstSPtr(const MzRange &mz_range, pappso::pappso_double rt_begin, pappso::pappso_double rt_end) overridepappso::MsRunXicExtractorDiskvirtual
pappso::MsRunXicExtractorInterface::getXicCstSPtr(const MzRange &mz_range) finalpappso::MsRunXicExtractorInterfacevirtual
getXicCstSPtrList(const std::vector< MzRange > &mz_range_list) overridepappso::MsRunXicExtractorDiskvirtual
getXicFromPwizMSDataFile(std::vector< Xic * > &xic_list, const std::vector< MzRange > &mass_range_list, pappso::pappso_double rt_begin, pappso::pappso_double rt_end)pappso::MsRunXicExtractorprotectedvirtual
m_bufferMaxSizepappso::MsRunXicExtractorDiskBufferprotected
m_bufferSizepappso::MsRunXicExtractorDiskBufferprotected
m_maxMzpappso::MsRunXicExtractorDiskprotected
m_minMzpappso::MsRunXicExtractorDiskprotected
m_msrun_pointspappso::MsRunXicExtractorprotected
m_msRunSliceListCachepappso::MsRunXicExtractorDiskprotected
m_mutexpappso::MsRunXicExtractorDiskprotected
m_retentionTimeListpappso::MsRunXicExtractorDiskprotected
m_rtSizepappso::MsRunXicExtractorDiskprotected
m_sliceBufferMappappso::MsRunXicExtractorDiskBufferprotected
m_temporaryDirectorypappso::MsRunXicExtractorDiskprotected
m_xicExtractMethodpappso::MsRunXicExtractorInterfaceprotected
mpa_temporaryDirectorypappso::MsRunXicExtractorDiskprotected
msp_msrun_readerpappso::MsRunXicExtractorInterfaceprotected
MsRunXicExtractor(MsRunReaderSPtr &msrun_reader)pappso::MsRunXicExtractorprotected
MsRunXicExtractor(const MsRunXicExtractor &other)pappso::MsRunXicExtractor
MsRunXicExtractorDisk(MsRunReaderSPtr &msrun_reader)pappso::MsRunXicExtractorDisk
MsRunXicExtractorDisk(const MsRunXicExtractorDisk &other)pappso::MsRunXicExtractorDisk
MsRunXicExtractorDisk(MsRunReaderSPtr &msrun_reader, const QDir &temporary_dir)pappso::MsRunXicExtractorDiskprotected
MsRunXicExtractorDiskBuffer(MsRunReaderSPtr &msrun_reader, const QDir &temporary_dir)pappso::MsRunXicExtractorDiskBufferprotected
MsRunXicExtractorDiskBuffer(const MsRunXicExtractorDiskBuffer &other)pappso::MsRunXicExtractorDiskBuffer
MsRunXicExtractorFactorypappso::MsRunXicExtractorDiskBufferprivate
MsRunXicExtractorInterface(MsRunReaderSPtr &msrun_reader)pappso::MsRunXicExtractorInterfaceprotected
MsRunXicExtractorInterface(const MsRunXicExtractorInterface &other)pappso::MsRunXicExtractorInterfaceprotected
prepareExtractor()pappso::MsRunXicExtractorDiskprotected
serializeMsRun()pappso::MsRunXicExtractorDiskprotected
setXicExtractMethod(XicExtractMethod method)pappso::MsRunXicExtractorInterface
storeSlices(std::map< unsigned int, MassSpectrum > &slice_vector, std::size_t ipos) overridepappso::MsRunXicExtractorDiskBufferprotectedvirtual
unserializeSlice(unsigned int slice_number)pappso::MsRunXicExtractorDiskprotected
~MsRunXicExtractor()pappso::MsRunXicExtractorvirtual
~MsRunXicExtractorDisk()pappso::MsRunXicExtractorDiskvirtual
~MsRunXicExtractorDiskBuffer()pappso::MsRunXicExtractorDiskBuffervirtual
~MsRunXicExtractorInterface()pappso::MsRunXicExtractorInterfaceprotectedvirtual