libpappsomspp
Library for mass spectrometry
|
Public Member Functions | |
RetentionTimeReader (std::vector< RtPoint > &rt_points) | |
virtual | ~RetentionTimeReader () |
virtual void | setQualifiedMassSpectrum (const QualifiedMassSpectrum &spectrum) override |
virtual bool | needPeakList () const override |
tells if we need the peak list (if we want the binary data) for each spectrum More... | |
![]() | |
virtual bool | needMsLevelPeakList (unsigned int ms_level) const final |
tells if we need the peak list (if we want the binary data) for each spectrum, given an MS level More... | |
virtual void | setNeedMsLevelPeakList (unsigned int ms_level, bool want_peak_list) final |
tells if we need the peak list given More... | |
virtual bool | shouldStop () |
virtual void | loadingEnded () |
virtual void | spectrumListHasSize (std::size_t size) |
virtual void | setReadAhead (bool is_read_ahead) final |
use threads to read a spectrum by batch of batch_size More... | |
virtual bool | isReadAhead () const |
tells if we want to read ahead spectrum More... | |
Private Attributes | |
std::vector< RtPoint > & | m_rtPoints |
Definition at line 54 of file msrunretentiontime.cpp.
|
inline |
Definition at line 58 of file msrunretentiontime.cpp.
|
inlinevirtual |
Definition at line 60 of file msrunretentiontime.cpp.
|
inlineoverridevirtual |
tells if we need the peak list (if we want the binary data) for each spectrum
Implements pappso::SpectrumCollectionHandlerInterface.
Definition at line 71 of file msrunretentiontime.cpp.
|
inlineoverridevirtual |
Implements pappso::SpectrumCollectionHandlerInterface.
Definition at line 62 of file msrunretentiontime.cpp.
References pappso::QualifiedMassSpectrum::getMassSpectrumId(), pappso::QualifiedMassSpectrum::getMsLevel(), pappso::QualifiedMassSpectrum::getRtInSeconds(), and pappso::MassSpectrumId::getSpectrumIndex().
|
private |
Definition at line 77 of file msrunretentiontime.cpp.