Performance Tuning
Spark offers many techniques for tuning the performance of DataFrame or SQL workloads. Those techniques, broadly speaking, include caching data, altering how datasets are partitioned, selecting the optimal join strategy, and providing the optimizer with additional information it can use to build more efficient execution plans.
- Caching Data
- Tuning Partitions
- Leveraging Statistics
- Optimizing the Join Strategy
- Adaptive Query Execution
Caching Data
Spark SQL can cache tables using an in-memory columnar format by calling spark.catalog.cacheTable("tableName")
or dataFrame.cache()
.
Then Spark SQL will scan only required columns and will automatically tune compression to minimize
memory usage and GC pressure. You can call spark.catalog.uncacheTable("tableName")
or dataFrame.unpersist()
to remove the table from memory.
Configuration of in-memory caching can be done via spark.conf.set
or by running
SET key=value
commands using SQL.
Property Name | Default | Meaning | Since Version |
---|---|---|---|
spark.sql.inMemoryColumnarStorage.compressed |
true | When set to true, Spark SQL will automatically select a compression codec for each column based on statistics of the data. | 1.0.1 |
spark.sql.inMemoryColumnarStorage.batchSize |
10000 | Controls the size of batches for columnar caching. Larger batch sizes can improve memory utilization and compression, but risk OOMs when caching data. | 1.1.1 |
Tuning Partitions
Property Name | Default | Meaning | Since Version |
---|---|---|---|
spark.sql.files.maxPartitionBytes |
134217728 (128 MB) | The maximum number of bytes to pack into a single partition when reading files. This configuration is effective only when using file-based sources such as Parquet, JSON and ORC. | 2.0.0 |
spark.sql.files.openCostInBytes |
4194304 (4 MB) | The estimated cost to open a file, measured by the number of bytes that could be scanned in the same time. This is used when putting multiple files into a partition. It is better to over-estimate, then the partitions with small files will be faster than partitions with bigger files (which is scheduled first). This configuration is effective only when using file-based sources such as Parquet, JSON and ORC. | 2.0.0 |
spark.sql.files.minPartitionNum |
Default Parallelism | The suggested (not guaranteed) minimum number of split file partitions. If not set, the default value is `spark.sql.leafNodeDefaultParallelism`. This configuration is effective only when using file-based sources such as Parquet, JSON and ORC. | 3.1.0 |
spark.sql.files.maxPartitionNum |
None | The suggested (not guaranteed) maximum number of split file partitions. If it is set, Spark will rescale each partition to make the number of partitions is close to this value if the initial number of partitions exceeds this value. This configuration is effective only when using file-based sources such as Parquet, JSON and ORC. | 3.5.0 |
spark.sql.shuffle.partitions |
200 | Configures the number of partitions to use when shuffling data for joins or aggregations. | 1.1.0 |
spark.sql.sources.parallelPartitionDiscovery.threshold |
32 | Configures the threshold to enable parallel listing for job input paths. If the number of input paths is larger than this threshold, Spark will list the files by using Spark distributed job. Otherwise, it will fallback to sequential listing. This configuration is only effective when using file-based data sources such as Parquet, ORC and JSON. | 1.5.0 |
spark.sql.sources.parallelPartitionDiscovery.parallelism |
10000 | Configures the maximum listing parallelism for job input paths. In case the number of input paths is larger than this value, it will be throttled down to use this value. This configuration is only effective when using file-based data sources such as Parquet, ORC and JSON. | 2.1.1 |
Coalesce Hints
Coalesce hints allow Spark SQL users to control the number of output files just like
coalesce
, repartition
and repartitionByRange
in the Dataset API, they can be used for performance
tuning and reducing the number of output files. The “COALESCE” hint only has a partition number as a
parameter. The “REPARTITION” hint has a partition number, columns, or both/neither of them as parameters.
The “REPARTITION_BY_RANGE” hint must have column names and a partition number is optional. The “REBALANCE”
hint has an initial partition number, columns, or both/neither of them as parameters.
SELECT /*+ COALESCE(3) */ * FROM t;
SELECT /*+ REPARTITION(3) */ * FROM t;
SELECT /*+ REPARTITION(c) */ * FROM t;
SELECT /*+ REPARTITION(3, c) */ * FROM t;
SELECT /*+ REPARTITION */ * FROM t;
SELECT /*+ REPARTITION_BY_RANGE(c) */ * FROM t;
SELECT /*+ REPARTITION_BY_RANGE(3, c) */ * FROM t;
SELECT /*+ REBALANCE */ * FROM t;
SELECT /*+ REBALANCE(3) */ * FROM t;
SELECT /*+ REBALANCE(c) */ * FROM t;
SELECT /*+ REBALANCE(3, c) */ * FROM t;
For more details please refer to the documentation of Partitioning Hints.
Leveraging Statistics
Apache Spark’s ability to choose the best execution plan among many possible options is determined in part by its estimates of how many rows will be output by every node in the execution plan (read, filter, join, etc.). Those estimates in turn are based on statistics that are made available to Spark in one of several ways:
- Data source: Statistics that Spark reads directly from the underlying data source, like the counts and min/max values in the metadata of Parquet files. These statistics are maintained by the underlying data source.
- Catalog: Statistics that Spark reads from the catalog, like the Hive Metastore. These statistics are collected or updated whenever you run
ANALYZE TABLE
. - Runtime: Statistics that Spark computes itself as a query is running. This is part of the adaptive query execution framework.
Missing or inaccurate statistics will hinder Spark’s ability to select an optimal plan, and may lead to poor query performance. It’s helpful then to inspect the statistics available to Spark and the estimates it makes during query planning and execution.
- Data object statistics: You can inspect the statistics on a table or column with
DESCRIBE EXTENDED
. - Query plan estimates: You can inspect Spark’s cost estimates in the optimized query plan via
EXPLAIN COST
orDataFrame.explain(mode="cost")
. - Runtime statistics: You can inspect these statistics in the SQL UI under the “Details” section as a query is running. Look for
Statistics(..., isRuntime=true)
in the plan.
Optimizing the Join Strategy
Automatically Broadcasting Joins
Property Name | Default | Meaning | Since Version |
---|---|---|---|
spark.sql.autoBroadcastJoinThreshold |
10485760 (10 MB) | Configures the maximum size in bytes for a table that will be broadcast to all worker nodes when performing a join. By setting this value to -1, broadcasting can be disabled. | 1.1.0 |
spark.sql.broadcastTimeout |
300 |
Timeout in seconds for the broadcast wait time in broadcast joins |
1.3.0 |
Join Strategy Hints
The join strategy hints, namely BROADCAST
, MERGE
, SHUFFLE_HASH
and SHUFFLE_REPLICATE_NL
,
instruct Spark to use the hinted strategy on each specified relation when joining them with another
relation. For example, when the BROADCAST
hint is used on table ‘t1’, broadcast join (either
broadcast hash join or broadcast nested loop join depending on whether there is any equi-join key)
with ‘t1’ as the build side will be prioritized by Spark even if the size of table ‘t1’ suggested
by the statistics is above the configuration spark.sql.autoBroadcastJoinThreshold
.
When different join strategy hints are specified on both sides of a join, Spark prioritizes the
BROADCAST
hint over the MERGE
hint over the SHUFFLE_HASH
hint over the SHUFFLE_REPLICATE_NL
hint. When both sides are specified with the BROADCAST
hint or the SHUFFLE_HASH
hint, Spark will
pick the build side based on the join type and the sizes of the relations.
Note that there is no guarantee that Spark will choose the join strategy specified in the hint since a specific strategy may not support all join types.
spark.table("src").join(spark.table("records").hint("broadcast"), "key").show()
spark.table("src").join(spark.table("records").hint("broadcast"), "key").show()
spark.table("src").join(spark.table("records").hint("broadcast"), "key").show();
src <- sql("SELECT * FROM src")
records <- sql("SELECT * FROM records")
head(join(src, hint(records, "broadcast"), src$key == records$key))
-- We accept BROADCAST, BROADCASTJOIN and MAPJOIN for broadcast hint
SELECT /*+ BROADCAST(r) */ * FROM records r JOIN src s ON r.key = s.key
For more details please refer to the documentation of Join Hints.
Adaptive Query Execution
Adaptive Query Execution (AQE) is an optimization technique in Spark SQL that makes use of the runtime statistics to choose the most efficient query execution plan, which is enabled by default since Apache Spark 3.2.0. Spark SQL can turn on and off AQE by spark.sql.adaptive.enabled
as an umbrella configuration.
Property Name | Default | Meaning | Since Version |
---|---|---|---|
spark.sql.adaptive.enabled |
true | When true, enable adaptive query execution, which re-optimizes the query plan in the middle of query execution, based on accurate runtime statistics. | 1.6.0 |
Coalescing Post Shuffle Partitions
This feature coalesces the post shuffle partitions based on the map output statistics when both spark.sql.adaptive.enabled
and spark.sql.adaptive.coalescePartitions.enabled
configurations are true. This feature simplifies the tuning of shuffle partition number when running queries. You do not need to set a proper shuffle partition number to fit your dataset. Spark can pick the proper shuffle partition number at runtime once you set a large enough initial number of shuffle partitions via spark.sql.adaptive.coalescePartitions.initialPartitionNum
configuration.
Property Name | Default | Meaning | Since Version |
---|---|---|---|
spark.sql.adaptive.coalescePartitions.enabled |
true |
When true and spark.sql.adaptive.enabled is true, Spark will coalesce contiguous shuffle partitions according to the target size (specified by spark.sql.adaptive.advisoryPartitionSizeInBytes ), to avoid too many small tasks.
|
3.0.0 |
spark.sql.adaptive.coalescePartitions.parallelismFirst |
true |
When true, Spark ignores the target size specified by spark.sql.adaptive.advisoryPartitionSizeInBytes (default 64MB) when coalescing contiguous shuffle partitions, and only respect the minimum partition size specified by spark.sql.adaptive.coalescePartitions.minPartitionSize (default 1MB), to maximize the parallelism. This is to avoid performance regressions when enabling adaptive query execution. It's recommended to set this config to false on a busy cluster to make resource utilization more efficient (not many small tasks).
|
3.2.0 |
spark.sql.adaptive.coalescePartitions.minPartitionSize |
1MB |
The minimum size of shuffle partitions after coalescing. Its value can be at most 20% of spark.sql.adaptive.advisoryPartitionSizeInBytes . This is useful when the target size is ignored during partition coalescing, which is the default case.
|
3.2.0 |
spark.sql.adaptive.coalescePartitions.initialPartitionNum |
(none) |
The initial number of shuffle partitions before coalescing. If not set, it equals to spark.sql.shuffle.partitions . This configuration only has an effect when spark.sql.adaptive.enabled and spark.sql.adaptive.coalescePartitions.enabled are both enabled.
|
3.0.0 |
spark.sql.adaptive.advisoryPartitionSizeInBytes |
64 MB |
The advisory size in bytes of the shuffle partition during adaptive optimization (when spark.sql.adaptive.enabled is true). It takes effect when Spark coalesces small shuffle partitions or splits skewed shuffle partition.
|
3.0.0 |
Splitting skewed shuffle partitions
Property Name | Default | Meaning | Since Version |
---|---|---|---|
spark.sql.adaptive.optimizeSkewsInRebalancePartitions.enabled |
true |
When true and spark.sql.adaptive.enabled is true, Spark will optimize the skewed shuffle partitions in RebalancePartitions and split them to smaller ones according to the target size (specified by spark.sql.adaptive.advisoryPartitionSizeInBytes ), to avoid data skew.
|
3.2.0 |
spark.sql.adaptive.rebalancePartitionsSmallPartitionFactor |
0.2 |
A partition will be merged during splitting if its size is small than this factor multiply spark.sql.adaptive.advisoryPartitionSizeInBytes .
|
3.3.0 |
Converting sort-merge join to broadcast join
AQE converts sort-merge join to broadcast hash join when the runtime statistics of any join side are smaller than the adaptive broadcast hash join threshold. This is not as efficient as planning a broadcast hash join in the first place, but it’s better than continuing the sort-merge join, as we can avoid sorting both join sides and read shuffle files locally to save network traffic (provided spark.sql.adaptive.localShuffleReader.enabled
is true).
Property Name | Default | Meaning | Since Version |
---|---|---|---|
spark.sql.adaptive.autoBroadcastJoinThreshold |
(none) |
Configures the maximum size in bytes for a table that will be broadcast to all worker nodes when performing a join. By setting this value to -1, broadcasting can be disabled. The default value is the same as spark.sql.autoBroadcastJoinThreshold . Note that, this config is used only in adaptive framework.
|
3.2.0 |
spark.sql.adaptive.localShuffleReader.enabled |
true |
When true and spark.sql.adaptive.enabled is true, Spark tries to use local shuffle reader to read the shuffle data when the shuffle partitioning is not needed, for example, after converting sort-merge join to broadcast-hash join.
|
3.0.0 |
Converting sort-merge join to shuffled hash join
AQE converts sort-merge join to shuffled hash join when all post shuffle partitions are smaller than the threshold configured in spark.sql.adaptive.maxShuffledHashJoinLocalMapThreshold
.
Property Name | Default | Meaning | Since Version |
---|---|---|---|
spark.sql.adaptive.maxShuffledHashJoinLocalMapThreshold |
0 |
Configures the maximum size in bytes per partition that can be allowed to build local hash map. If this value is not smaller than spark.sql.adaptive.advisoryPartitionSizeInBytes and all the partition sizes are not larger than this config, join selection prefers to use shuffled hash join instead of sort merge join regardless of the value of spark.sql.join.preferSortMergeJoin .
|
3.2.0 |
Optimizing Skew Join
Data skew can severely downgrade the performance of join queries. This feature dynamically handles skew in sort-merge join by splitting (and replicating if needed) skewed tasks into roughly evenly sized tasks. It takes effect when both spark.sql.adaptive.enabled
and spark.sql.adaptive.skewJoin.enabled
configurations are enabled.
Property Name | Default | Meaning | Since Version |
---|---|---|---|
spark.sql.adaptive.skewJoin.enabled |
true |
When true and spark.sql.adaptive.enabled is true, Spark dynamically handles skew in sort-merge join by splitting (and replicating if needed) skewed partitions.
|
3.0.0 |
spark.sql.adaptive.skewJoin.skewedPartitionFactor |
5.0 |
A partition is considered as skewed if its size is larger than this factor multiplying the median partition size and also larger than spark.sql.adaptive.skewJoin.skewedPartitionThresholdInBytes .
|
3.0.0 |
spark.sql.adaptive.skewJoin.skewedPartitionThresholdInBytes |
256MB |
A partition is considered as skewed if its size in bytes is larger than this threshold and also larger than spark.sql.adaptive.skewJoin.skewedPartitionFactor multiplying the median partition size. Ideally, this config should be set larger than spark.sql.adaptive.advisoryPartitionSizeInBytes .
|
3.0.0 |
spark.sql.adaptive.forceOptimizeSkewedJoin |
false | When true, force enable OptimizeSkewedJoin, which is an adaptive rule to optimize skewed joins to avoid straggler tasks, even if it introduces extra shuffle. | 3.3.0 |
Advanced Customization
You can control the details of how AQE works by providing your own cost evaluator class or by excluding AQE optimizer rules.
Property Name | Default | Meaning | Since Version |
---|---|---|---|
spark.sql.adaptive.optimizer.excludedRules |
(none) | Configures a list of rules to be disabled in the adaptive optimizer, in which the rules are specified by their rule names and separated by comma. The optimizer will log the rules that have indeed been excluded. | 3.1.0 |
spark.sql.adaptive.customCostEvaluatorClass |
(none) |
The custom cost evaluator class to be used for adaptive execution. If not being set, Spark will use its own SimpleCostEvaluator by default.
|
3.2.0 |